| Apr 20, 2020 |
BCAM1947
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1946
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1945
|
Burkholderia cenocepacia
J2315 |
New product name: RND-9 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-9 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-9; Major RND-9 substrate is tobramycin, chlorhexidine (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0927
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0926
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0925
|
Burkholderia cenocepacia
J2315 |
New product name: RND-8 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-8 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-8; Major RND-8 substrate is tobramycin (in biofilm grown cells). New PMIDs: 25267676, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2449
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2550
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2551
|
Burkholderia cenocepacia
J2315 |
New product name synonym: RND-10 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of ceoAB-opcM (rnd-10) operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump (RND-10); Major substrates of RND-10 are chloramphenicol, flouroquinolones and trimethoprim. New PMIDs: 14755343, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2820
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2821
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2822
|
Burkholderia cenocepacia
J2315 |
New product name: RND-4 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-4 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-4; Major RND-4 substrates are aztreonam, chloramphenicol, fluoroquinolones, tobramycin. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1676
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1675
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL1674
|
Burkholderia cenocepacia
J2315 |
New product name: RND-3 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-3 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-3; ; Major RND-3 substrates are nalidixic acid, ciprofloxacin, tobramycin, chlorhexidine. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0593
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system outer membrane protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0592
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system transporter protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0591
|
Burkholderia cenocepacia
J2315 |
New product name: RND-1 efflux system membrane fusion protein. New product name confidence: Class 1. New comment: Member of rnd-1 operon encoding Resistance-Nodulation-Cell Division (RND) efflux pump RND-1. New PMIDs: 19761586, 25926825.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2166
|
Burkholderia cenocepacia
J2315 |
New gene name: penR. New PMID: 26416862.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2165
|
Burkholderia cenocepacia
J2315 |
New gene name: penB. New product name confidence: Class 1. New PMIDs: 26416862, 19075063.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BP1026B_II1037
|
Burkholderia pseudomallei
1026b |
New product name: class A beta-lactamase, PenA. New product name confidence: Class 1. New comment: B. multivorans PenA is an inhibitor-resistant carbapenemase, whereas the B. pseudomallei PenA is an extended spectrum beta-lactamase (PMID:27620956). New PMID: 1718214.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
C6Q10_RS14220
|
Burkholderia multivorans
AU19564 |
New gene name: ampC2. New gene name synonym: ampC. New product name: class C beta-lactamase. New product name synonym: AmpC2. New product name confidence: Class 2. New PMID: 30012762.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
DM80_RS04270
|
Burkholderia multivorans
DDS 15A-1 |
New gene name: ampC1. New gene name synonym: ampC. New product name synonym: AmpC1. New product name confidence: Class 2. New PMID: 30012762.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BMULJ_RS27615
|
Burkholderia multivorans
ATCC 17616 |
New gene name: ampC1. New gene name synonym: ampC. New product name synonym: AmpC1. New product name confidence: Class 2. New comment: AmpC1 from B. multivorans ATCC 17616 possesses a narrow spectrum, and the contribution of AmpC1 to _-lactam resistance appears to be negligible, yet expression of AmpC1 is regulated by _-lactam inducers including imipenem (PMID:30012762). New PMID: 30012762.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
Bmul_6008
|
Burkholderia multivorans
ATCC 17616 |
New gene name: ampC1. New gene name synonym: ampC. New product name: class C beta-lactamase. New product name confidence: Class 1. New comment: AmpC1 from B. multivorans ATCC 17616 possesses a narrow spectrum, and the contribution of AmpC1 to _-lactam resistance appears to be negligible, yet expression of AmpC1 is regulated by _-lactam inducers including imipenem (PMID:30012762). New PMID: 30012762.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
Bmul_3689
|
Burkholderia multivorans
ATCC 17616 |
New gene name: penA. New product name: class A beta-lactamase, PenA. New product name confidence: Class 1. New comment: B. multivorans PenA is an inhibitor-resistant carbapenemase, whereas the B. pseudomallei PenA is an extended spectrum beta-lactamase (PMID:27620956). New PMID: 30012762.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0225
|
Burkholderia cenocepacia
J2315 |
New PMID: 30513124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0208
|
Burkholderia cenocepacia
J2315 |
New PMID: 30513124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
QU43_RS64696
|
Burkholderia cenocepacia
J2315 |
New PMID: 29359187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
QU43_RS53446
|
Burkholderia cenocepacia
J2315 |
New gene name: bdhR1. New gene name synonym: ncS27. New product name: Burkholderia double-hairpin sRNA regulator bdhR1. New product name confidence: Class 1. New PMID: 31464662.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BURCENK562V_RS20790
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: bptpA. New product name: Burkholderia phosphotyrosine phosphatase, BPtpA. New product name synonym: Low molecular weight protein tyrosine phosphatase, class II.I. New product name confidence: Class 1. New PMID: 31978399.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2200
|
Burkholderia cenocepacia
J2315 |
New gene name: bptpA. New product name: Burkholderia phosphotyrosine phosphatase, BPtpA. New product name synonym: Low molecular weight protein tyrosine phosphatase, class II.I. New product name confidence: Class 1. New PMID: 31978399.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS18335
|
Burkholderia cenocepacia
H111 |
New gene name: copD. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS18330
|
Burkholderia cenocepacia
H111 |
New gene name: copC. New product name: CopC. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS18325
|
Burkholderia cenocepacia
H111 |
New gene name: cusF. New product name: CusF. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS18300
|
Burkholderia cenocepacia
H111 |
New gene name: copR. New product name: CopR. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47456. New PMID: 11004187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS18295
|
Burkholderia cenocepacia
H111 |
New gene name: copS. New product name: CopS. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47457. New PMID: 11004187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS11185
|
Burkholderia cenocepacia
H111 |
New gene name: cueR. New product name: CueR. New product name confidence: Class 2. Name transferred from: UniProtKB:P0A9G4. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS12975
|
Burkholderia cenocepacia
H111 |
New gene name: cueO. New product name: CueO. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS15965
|
Burkholderia cenocepacia
H111 |
New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS01625
|
Burkholderia cenocepacia
H111 |
New product name confidence: Class 2. New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
I35_RS29310
|
Burkholderia cenocepacia
H111 |
New gene name: copA. New product name: Copper-exporting P-type ATPase, CopA. New product name confidence: Class 2. Name transferred from: UniProtKB:Q59385. New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMIDs: 32090500, 12832075.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0450
|
Burkholderia cenocepacia
J2315 |
New gene name: copD. New product name: CopD. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0449
|
Burkholderia cenocepacia
J2315 |
New gene name: copC. New product name: CopC. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0448
|
Burkholderia cenocepacia
J2315 |
New gene name: cusF. New product name: CusF. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0443
|
Burkholderia cenocepacia
J2315 |
New gene name: copR. New product name: CopR. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47456. New PMID: 11004187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0442
|
Burkholderia cenocepacia
J2315 |
New gene name: copS. New product name: CopS. New product name confidence: Class 2. Name transferred from: UniProtKB:Q47457. New PMID: 11004187.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2309
|
Burkholderia cenocepacia
J2315 |
New gene name: cueR. New product name: CueR. New product name confidence: Class 2. Name transferred from: UniProtKB:P0A9G4. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL2733
|
Burkholderia cenocepacia
J2315 |
New gene name: cueO. New product name: CueO. New product name confidence: Class 2. New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL0471
|
Burkholderia cenocepacia
J2315 |
New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAL0323
|
Burkholderia cenocepacia
J2315 |
New product name confidence: Class 2. New comment: Required for growth in the presence of 20__M CuSO4 (PMID:32090500). New PMID: 32090500.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS09590
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0335
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS10080
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAS0236
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS15905
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BURCENK562V_RS08875
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM1115
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMID: 22919579.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS07805
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BURCENK562V_RS15440
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM2418
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: Comparative DNA sequence analysis of BCAM2418 genes (structural and promoter regions) of various B. cenocepacia isolates revealed that their lengths greatly vary according to the number of repetitive elements (PMID:32097539). New PMIDs: 22919579, 32097539.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0224
|
Burkholderia cenocepacia
J2315 |
New product name: collagen type 1-binding trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: BCAM0224 is a trimeric autotransporter adhesin required for cell adhesion and virulence (PMID:20019083). New PMIDs: 22919579, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS20305
|
Burkholderia cenocepacia
K56-2 |
New product name: vitronectin-binding trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: A BCAM0223::Tp mutant was deficient in hemagglutination, affected in adherence to vitronectin and in biofilm formation and showed attenuated virulence in the Galleria mellonella model of infection. . New PMIDs: 22919579, 22848588, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0223
|
Burkholderia cenocepacia
J2315 |
New product name: vitronectin-binding trimeric autotransporter adhesin. New product name confidence: Class 1. New comment: A BCAM0223::Tp mutant was deficient in hemagglutination, affected in adherence to vitronectin and in biofilm formation and showed attenuated virulence in the Galleria mellonella model of infection. . New PMIDs: 22919579, 22848588, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
WQ49_RS20325
|
Burkholderia cenocepacia
K56-2 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMIDs: 22919579, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 20, 2020 |
BCAM0219
|
Burkholderia cenocepacia
J2315 |
New product name: trimeric autotransporter adhesin. New product name confidence: Class 2. New PMIDs: 22919579, 20019083.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
AK34_RS25965
|
Burkholderia dolosa
AU0158 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
bglu_1g04490
|
Burkholderia glumae
BGR1 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BMAA0543
|
Burkholderia mallei
ATCC 23344 |
New PubMed ID: 21296885. New PubMed ID: 18776009. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BTH_I2900
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BCEP18194_RS08230
|
Burkholderia lata
383 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BMAA0543
|
Burkholderia mallei
ATCC 23344 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
I35_RS02045
|
Burkholderia cenocepacia
H111 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BPSL3041
|
Burkholderia pseudomallei
K96243 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BP1026B_I0260
|
Burkholderia pseudomallei
1026b |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BCAL0408
|
Burkholderia cenocepacia
J2315 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28560
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11500
|
Burkholderia cenocepacia
K56-2 |
New gene name: pacL. New product name: PacL. New product name synonym: putative 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. New product name confidence: Class 2. New PubMed ID: 21296885. New PubMed ID: 18776009. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P3J4.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
AK34_RS09175
|
Burkholderia dolosa
AU0158 |
New product name: putative (R)-specific oxepin-CoA hydratase. New product name synonym: PaaZ-ECH. New product name confidence: Class 2. New PubMed ID: 21296885. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P232.
|
Geoff Winsor, Simon Fraser University. Transferred annotation from the B. cenocepacia annotation provided by D. Lavellee and S. Cardona.
|
| Apr 30, 2018 |
BCAS0364
|
Burkholderia cenocepacia
J2315 |
New product name: putative (R)-specific oxepin-CoA hydratase. New product name synonym: PaaZ-ECH. New product name confidence: Class 2. New PubMed ID: 21296885. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P232.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS32320
|
Burkholderia cenocepacia
K56-2Valvano |
New product name: putative (R)-specific oxepin-CoA hydratase. New product name synonym: PaaZ-ECH. New product name confidence: Class 2. New PubMed ID: 21296885. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P232.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS09445
|
Burkholderia cenocepacia
K56-2 |
New product name: putative (R)-specific oxepin-CoA hydratase. New product name synonym: PaaZ-ECH. New product name confidence: Class 2. New PubMed ID: 21296885. New comment: in E coli, paaZ encodes a bifunctional protein consisting of an N-terminal NADP-dependent aldehyde dehydrogenase domain and a C-terminal MaoC-like (R)-specific enoyl-CoA hydratase domain. In Burkholderia genomes, a gene incorrectly annotated as paaZ (e.g WQ49_RS11500) encodes only one of the two domains found in E.coli paaZ (the domain with semialdehyde dehydrogenase activity) and so is renamed PacL (PMID:21296885) but was also referred to as PaaZ-ALDH in the manuscript. In the same study , a separate A. aromaticum, protein (UniProtKB:Q5P232) with the (R)-hydratase activity was annotated as Ech-Aa and the Burkholderia ortholog was annotated as PaaZ-ECH.
. Annotation transferred from: UniProtKB:Q5P232.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11515
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaI. New product name: PaaI. New product name synonym: putative phenylacetatyl-CoA thioesterase. New product name confidence: Class 2. New PubMed ID: 16464851. New comment:
. Annotation transferred from: UniProtKB:P76084.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BCAM1711
|
Burkholderia cenocepacia
J2315 |
New gene name: paaK2. New product name: Paak2. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS11890
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaK2. New product name: Paak2. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS04255
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaK2. New product name: Paak2. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BCAL0404
|
Burkholderia cenocepacia
J2315 |
New gene name: paaK1. New product name: PaaK1. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28540
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaK1. New product name: PaaK1. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11520
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaK1. New product name: PaaK1. New product name synonym: phenylacetate-CoA ligase. New product name confidence: Class 1. New PubMed ID: 21388965. New comment:
.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28555
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaJ. New product name: PaaJ. New product name synonym: putative beta-ketothiolase (3-oxo-5,6-dehydrosuberyl-CoA thiolase). New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P0C7L2.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11505
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaJ. New product name: PaaJ. New product name synonym: putative beta-ketothiolase (3-oxo-5,6-dehydrosuberyl-CoA thiolase). New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P0C7L2.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS11895
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaH. New product name: PaaH. New product name synonym: putative 3-hydroxyadipyl-CoA dehydrogenase. New product name confidence: Class 2. New PubMed ID: 20660314. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P76083.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS04260
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaH. New product name: PaaH. New product name synonym: putative 3-hydroxyadipyl-CoA dehydrogenase. New product name confidence: Class 2. New PubMed ID: 20660314. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P76083.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS28550
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaG. New product name: PaaG. New product name synonym: putative 1,2-epoxyphenylacetyl-CoA isomerase/ 3,4-dehydroadipyl-CoA isomerase. New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P77467.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11510
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaG. New product name: PaaG. New product name synonym: putative 1,2-epoxyphenylacetyl-CoA isomerase/ 3,4-dehydroadipyl-CoA isomerase. New product name confidence: Class 2. New PubMed ID: 12846838. New comment:
. Annotation transferred from: UniProtKB:P77467.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS11495
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaF. New product name: PaaF. New product name synonym: putative 2,3-dehydroadipyl-CoA hydratase. New product name confidence: Class 2. New PubMed ID: 18776009. New PubMed ID: 20660314. New comment:
. Annotation transferred from: UniProtKB:P76082.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS13890
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaE. New product name: PaaE. New product name synonym: putative reductase subunit of ring 1,2-phenylacetyl-CoA epoxidase. New product name confidence: Class 2. New PubMed ID: 18776009. New PubMed ID: 21247899. New comment:
. Annotation transferred from: UniProtKB:P76081.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS05100
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: paaC. New product name: PaaC. New product name synonym: putative subunit PaaC, structural subunit, of ring 1,2-phenylacetyl-CoA epoxidase. New product name confidence: Class 2. New PubMed ID: 21247899. New comment:
. Annotation transferred from: UniProtKB:P76079.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
WQ49_RS13900
|
Burkholderia cenocepacia
K56-2 |
New gene name: paaC. New product name: PaaC. New product name synonym: putative subunit PaaC, structural subunit, of ring 1,2-phenylacetyl-CoA epoxidase. New product name confidence: Class 2. New PubMed ID: 21247899. New comment:
. Annotation transferred from: UniProtKB:P76079.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|
| Apr 30, 2018 |
BURCENK562V_RS05095
|
Burkholderia cenocepacia
K56-2Valvano |
New product name synonym: putative subunit PaaB of ring 1,2-phenylacetyl-CoA epoxidase. New product name confidence: Class 2. New PubMed ID: 16997993. New comment:
. Annotation transferred from: UniProtKB:P76078.
|
Dustin Lavallee and Silvia Cardona, University of Manitoba
|