| Jan 25, 2011 |
BCAL1702
|
Burkholderia cenocepacia
J2315 |
New pathway: ornibactin biosynthesis and transport. New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 16672617. New genomic context: ornibactin gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3110
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3111
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3112
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3113
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3114
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3115
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3116
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3118
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3119
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3120
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3121
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3122
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3123
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3124
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL3125
|
|
New pathway: Lipopolysaccharide biosynthesis. New pathway: O antigen biosynthesis. New GO accession: GO:0009243 [IGC]. New evidence reference (PMID): 15687196. New genomic context: O-antigen gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2944
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New pathway: ADP-L-glycero-D-manno-heptose synthesis pathway. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2947
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [ISS]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL2943
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipopolysaccharide core region biosynthesis. New GO accession: GO:0009244 [IGC]. New evidence reference (PMID): 16513737. New genomic context: hld gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1929
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1930
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1931
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1932
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1933
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1934
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAL1935
|
Burkholderia cenocepacia
J2315 |
New pathway: Lipopolysaccharide biosynthesis. New pathway: lipid A modification. New GO accession: GO:0009245 [ISS]. New evidence reference (PMID): 17337576. New genomic context: putative aminoarabinose (Ara4N) biosynthesis gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0860
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0861
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0863
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0864
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New GO accession: GO:0016757 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0858
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0859
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0862
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0865
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0855
|
Burkholderia cenocepacia
J2315 |
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New evidence reference (PMID): 19383677. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM0856
|
|
New pathway: cepacia biosynthesis. New pathway: exopolysaccharide biosynthesis. New GO accession: GO:0045227 [ISS]. New evidence reference (PMID): 14637140. New evidence reference (PMID): 11006084. New genomic context: Burkholderia cepacia complex (bce) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS39311
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 603652..603910 (+ strand). New start coordinate: 603652. New end coordinate: 603910. New gene name: ncS06. New product name: small regulatory ncRNA ncS06. New gene name synonym: ncRNA7. New product name synonym: BTH_s1. New product name confidence: Class 1. New PubMed ID: 29142288. New PubMed ID: 24884623. New PubMed ID: 19234113. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS38736
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 479440..479506 (- strand). New start coordinate: 479440. New end coordinate: 479506. New gene name: ncS05. New product name: double-hairpin RNA ncS05. New product name confidence: Class 1. New PubMed ID: 29142288. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS53446
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 3666557..3666648 (- strand). New start coordinate: 3666557. New end coordinate: 3666648. New gene name: ncS27. New product name: double-hairpin RNA ncS27. New product name confidence: Class 1. New PubMed ID: 29142288. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS51716
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 3297991..3298074 (- strand). New start coordinate: 3297991. New end coordinate: 3298074. New gene name: ncS25. New product name: small regulatory ncRNA ncS25. New product name confidence: Class 1. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS37856
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 292949..293053 (+ strand). New start coordinate: 292949. New end coordinate: 293053. New gene name: ncS04. New product name: small regulatory ncRNA ncS04. New product name synonym: anti-hemB. New product name confidence: Class 1. New PubMed ID: 29142288. New PubMed ID: 23282220. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS49841
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2912201..2912283 (+ strand). New start coordinate: 2912201. New end coordinate: 2912283. New gene name: ncS16. New product name: small regulatory ncRNA ncS16. New product name confidence: Class 1. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS65806
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2568766..2568918 (+ strand). New start coordinate: 2568766. New end coordinate: 2568918. New gene name: ncS37. New product name: small regulatory ncRNA ncS37. New product name confidence: Class 1. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS48121
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2548559..2548685 (+ strand). New start coordinate: 2548559. New end coordinate: 2548685. New gene name: ncS63. New product name: small regulatory ncRNA ncS63. New product name synonym: BTH_s39. New product name confidence: Class 1. New PubMed ID: 29142288. New PubMed ID: 24884623. New comment: Confirmed by Northern Blot. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS48101
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2545296..2545503 (- strand). New start coordinate: 2545296. New end coordinate: 2545503. New gene name: ncS11. New product name: small regulatory ncRNA ncS11. New gene name synonym: ncRNA13. New product name confidence: Class 1. New PubMed ID: 29142288. New PubMed ID: 19234113. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS64696
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2304213..2304378 (- strand). New start coordinate: 2304213. New end coordinate: 2304378. New gene name: ncS35. New product name: small regulatory ncRNA ncS35. New product name confidence: Class 1. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS37471
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 221314..221372 (+ strand). New start coordinate: 221314. New end coordinate: 221372. New gene name: ncS03. New product name: double-hairpin RNA ncS03. New product name confidence: Class 1. New PubMed ID: 29142288. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS63756
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 2089713..2089769 (+ strand). New start coordinate: 2089713. New end coordinate: 2089769. New gene name: ncS62. New product name: double-hairpin RNA ncS62. New product name confidence: Class 1. New PubMed ID: 29142288. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS36586
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 20581..20691 (+ strand). New start coordinate: 20581. New end coordinate: 20691. New gene name: ncS01. New product name: small regulatory ncRNA ncS01. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end confirmed by RACE. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
QU43_RS41981
|
Burkholderia cenocepacia
J2315 |
New ncRNA gene identified at 1179680..1179807 (+ strand). New start coordinate: 1179680. New end coordinate: 1179807. New gene name: ncS54. New product name: small regulatory ncRNA ncS54. New product name confidence: Class 1. New PubMed ID: 29142288. New comment: Confirmed by Northern Blot. 3'end defined in dRNA-Seq data.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Sep 15, 2008 |
Bcenmc03_0253
|
Burkholderia cenocepacia
MC0-3 |
New homology: 99% identity ot SigK[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcep18194_A3374
|
|
New homology: 99% identity ot SigK[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcep1808_0231
|
Burkholderia vietnamiensis
G4 |
New homology: 95% identity ot SigK[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bamb_4118
|
|
New homology: 94% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
| Apr 22, 2009 |
BCAM1870
|
Burkholderia cenocepacia
J2315 |
New homology: 90% identity to CepI[B. vietnamiensis G4]. New evidence reference (PMID): 17277056.
|
Literature review. Sokol, P. A. University of Calgary Health Sciences Centre, Calgary, Alberta
|
| Sep 15, 2008 |
Bcenmc03_3641
|
Burkholderia cenocepacia
MC0-3 |
New homology: 89% idenity to sigE[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen_2849
|
|
New homology: 88% identity to EcfA2[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen2424_0258
|
|
New homology: 88% idenity to EcfA2[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcenmc03_0240
|
Burkholderia cenocepacia
MC0-3 |
New homology: 88% idenity to EcfA2[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen_6259
|
|
New homology: 85% identity to sigL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcen2424_1820
|
|
New homology: 85% identity to SigL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bcenmc03_1844
|
Burkholderia cenocepacia
MC0-3 |
New homology: 85% identity to SigL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bamb_1758
|
|
New homology: 84% idenitty to SigL[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Sep 15, 2008 |
Bamb_6159
|
|
New homology: 50% idenity to sigI[B. cenocepacia J2315]. New evidence reference (PMID): 17784948.
|
Literature review. Based on article by Cournoyer, B. Universite Lyon, France.
|
| Aug 1, 2008 |
Bcen_4887
|
|
New homology: 100% identity to PehA [Burkholderia cepacia ATCC 25416]. New evidence reference (PMID): 17493828. New evidence reference (PMID): 17627609.
|
Literature review. Massa, C. Structural Biology Laboratory, Trieste, Italy
|
| Feb 4, 2013 |
BCAL1688
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:1900704(IMP).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2224
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2225
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2226
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2227
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2228
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2231
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2232
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2233
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2234
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2235
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0033212 [IGC]. New evidence reference (PMID): 9846750. New evidence reference (PMID): 18931103.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2758
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IMP]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2761
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IMP]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 14638436. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2143
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IMP]. New evidence reference (PMID): 16113259.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2756
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IGC]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2757
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IGC]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2759
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IGC]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2760
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IGC]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BCAM2762
|
Burkholderia cenocepacia
J2315 |
New GO accession: GO:0016337 [IGC]. New evidence reference (PMID): 7585148. New evidence reference (PMID): 18931103. New evidence reference (PMID): 16113259. New genomic context: part of cable pilus (cbl) gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Feb 4, 2013 |
BCAM0223
|
Burkholderia cenocepacia
J2315 |
New GO Accession: GO:0007160(IMP). New PubMed reference: 22848588. New genomic context: TAA gene cluster.
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Sep 15, 2008 |
Bcen_3302
|
|
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New homology: 81% identity to ZmpB[B. cenocepacia J2315]. New evidence reference (PMID): 16790782.
|
Literature review. Based on article by Sokol, P. A. University of Calgary, Calgary, Alberta.
|
| Sep 15, 2008 |
Bcen2424_5066
|
|
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New homology: 81% identity to ZmpB[B. cenocepacia J2315]. New evidence reference (PMID): 16790782.
|
Literature review. Based on article by Sokol, P. A. University of Calgary, Calgary, Alberta.
|
| Sep 15, 2008 |
Bamb_4475
|
|
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class 1. New homology: 77% identity to ZmpB[B. cenocepacia J2315]. New evidence reference (PMID): 16790782.
|
Literature review. Based on article by Sokol, P. A. University of Calgary, Calgary, Alberta.
|
| Sep 15, 2008 |
Bcep18194_B0597
|
|
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular. New subcellular localization confidence: Class . New homology: 79% identity to ZmpB[B. cenocepacia J2315]. New evidence reference (PMID): 16790782.
|
Literature review. Based on article by Sokol, P. A. University of Calgary, Calgary, Alberta.
|
| Apr 10, 2015 |
BURCENK562V_RS1
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: zmpB. New product name: zinc metalloprotease ZmpB. New product name confidence: Class 1. New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 16790782 .New PubMed ID: 16790782.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS3
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: zmpA. New product name: zinc metalloprotease ZmpA. New product name confidence: Class 1. New subcellular localization: Extracellular (1). New subcellular localization evidence code (ECO): ECO:0000279 .New subcellular localization PMID: 12904566 .New PubMed ID: 12904566.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0909
|
Burkholderia cenocepacia
J2315 |
New gene name: ybeY. New product name: rRNA maturation RNAse YbeY. New product name confidence: Class 2. New PubMed ID: 20807199. New PubMed ID: 23638028. New PubMed ID: 19181801. New comment: .Annotation transferred from: UniprotKB:P0A898.
|
Bart Devreese. Ghent University, Belgium
|
| Apr 30, 2018 |
BURCENK562V_RS29145
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzx. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3114.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29075
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzt. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3130.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29070
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wzm. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3131.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29125
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wecA. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3118.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29085
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxF. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3128.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BURCENK562V_RS29090
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxE. New product name confidence: Class 2. New PubMed ID: 16513737.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29095
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxD. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3124.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS29100
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: wbxC. New product name confidence: Class 2. New PubMed ID: 15687196. New comment: Belongs to the O antigen biosynthesis gene cluster.Annotation transferred from: BGD:BCAL3123.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|