This is a list of Burkholderia strains for which annotations and sequences can be found in the Burkholderia Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

3266 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Burkholderia cenocepacia J2315 GCF_000009485.1
latest
- Complete Genome 7298 (0) SAMEA1705928 human cystic fibrosis sputum United Kingdom: Edinburgh European Bioinformatics Institute
Sanger Institute
Strain Details
Burkholderia dolosa AU0158 (complete genome) GCF_000959505.1
latest
- Complete Genome 5641 (45) SAMN03144971 human Human Clinical (cystic fibrosis patient) USA 472 (bcc) Los Alamos National Laboratory
Strain Details
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1
latest
- Complete Genome 5935 (0) SAMEA1705938 10 (bpseudomallei) European Bioinformatics Institute
Sanger Institute
Strain Details
Burkholderia thailandensis E264 ATCC 700388 GCF_000012365.1
latest
- Complete Genome 5712 (0) SAMN02604021 NCBI
TIGR
Strain Details
Burkholderia glumae BGR1 GCF_000022645.2
latest
- Complete Genome 6258 (0) SAMN02603166 NCBI
Seoul National University
Strain Details
Burkholderia multivorans ATCC 17616 - Assembly GCF_000018505.1 GCF_000018505.1
latest
- Complete Genome 6346 (0) SAMN00623032 soil 21 (bcc) Joint Genome Institute, U.S. Department of Energy
DOE Joint Genome Institute
Strain Details
Burkholderia ambifaria AMMD - Assembly GCF_000203915.1 GCF_000203915.1
latest
- Complete Genome 6530 (34) SAMN02598309 77 (bcc)
DOE Joint Genome Institute
Strain Details
Burkholderia cenocepacia H111 GCF_000236215.2
latest
- Complete Genome 6815 (22) SAMEA3138403 human cystic fibrosis sputum Germany: Hannover 1506 (bcc) European Bioinformatics Institute
University of Zurich
Strain Details
Burkholderia cenocepacia K56-2Valvano GCF_000333155.2
latest
19 Contig 6986 (84) SAMN00255233 human cystic fibrosis sputum Canada: Toronto 227 (bcc) J. Craig Venter Institute
Strain Details
Burkholderia lata 383 GCF_000012945.1
latest
- Complete Genome 7643 (41) SAMN02598262 forest soil Trinidad
DOE Joint Genome Institute
Strain Details
Burkholderia mallei ATCC 23344 GCF_000011705.1
latest
- Complete Genome 5091 (0) SAMN02603987
TIGR
Strain Details
Burkholderia pseudomallei 1026b - Assembly GCF_000260515.1 GCF_000260515.1
latest
- Complete Genome 6264 (0) SAMN02604257 human septicemic melioidosis blood Thailand 102 (bpseudomallei) NCBI
University of Washington
Strain Details
Burkholderia vietnamiensis G4 GCF_000016205.1
latest
- Complete Genome 7639 (0) SAMN02598263 USA: Florida 60 (bcc) U.S. Environmental Protection Agency
DOE Joint Genome Institute
Strain Details
Burkholderia agricolaris GCF_009455635.1
latest
- Contig 7596 (78) SAMN09651435 USA: Virginia Washington University in St. Louis
Strain Details
Burkholderia ambifaria GCF_002980755.1
latest
- Contig 6571 (279) SAMN08628013 unknown sputum Unknown 925 (bcc) JCVI
Strain Details
Burkholderia ambifaria GCF_002981655.1
latest
- Contig 6746 (258) SAMN08627987 unknown sputum Unknown 282 (bcc) JCVI
Strain Details
Burkholderia ambifaria GCF_900631675.1
latest
- Contig 7113 (177) SAMEA3471192 165 (bcc)
SC
Strain Details
Burkholderia ambifaria AMMD GCF_000959545.1
latest
- Complete Genome 6530 (34) SAMN03140296 Pea rhizosphere USA: Wisconsin 77 (bcc) Los Alamos National Laboratory
Strain Details
Burkholderia ambifaria FDAARGOS_419 GCF_002554435.1
latest
4 Contig 6638 (153) SAMN07312463 Not Applicable environmental 77 (bcc) US Food and Drug Administration
FDA
Strain Details
Burkholderia ambifaria IOP40-10 GCF_000181975.1
latest
629 Contig 7034 (861) SAMN00000046 Joint Genome Institute, U.S. Department of Energy
DOE Joint Genome Institute
Strain Details