| Jan 25, 2011 |
BTH_II0259
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0869
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-5. New product name: TssC-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1497
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0517
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-4. New product name: type VI secretion system protein TssC-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1900
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-4. New product name: TssC-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0172
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-3. New product name: type VI secretion system protein TssC-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0098
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-2. New product name: type VI secretion system protein TssC-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0122
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-2. New product name: TssC-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3106
|
Burkholderia pseudomallei
K96243 |
New gene name: tssC-1. New product name: type VI secretion system protein TssC-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2963
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssC-1. New product name: TssC-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0341
|
Burkholderia cenocepacia
J2315 |
New gene name: tssB. New product name: type VI secretion system protein TssB. New gene name synonym: bcsL. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 20729192. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster.Annotation transferred from: NA.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01720
|
Burkholderia cenocepacia
H111 |
New gene name: tssB. New product name: type VI secretion system protein TssB. New gene name synonym: bcsL. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 20729192. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28235
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tssB. New product name: type VI secretion system protein TssB. New gene name synonym: bcsL. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 20729192. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0743
|
|
New gene name: tssB. New product name confidence: Class 1. New PubMed ID: 17555434. New PubMed ID: 21300775. New PubMed ID: 24672321. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0522
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-6. New product name: type VI secretion system protein TssB-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2100
|
Burkholderia pseudomallei
K96243 |
New gene name: TssB-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0258
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0870
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-5. New product name: TssB-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1496
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0516
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-4. New product name: type VI secretion system protein TssB-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1901
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-4. New product name: TssB-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0173
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-3. New product name: type VI secretion system protein TssB-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0097
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-2. New product name: type VI secretion system protein TssB-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0121
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-2. New product name: TssB-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3107
|
Burkholderia pseudomallei
K96243 |
New gene name: tssB-1. New product name: type VI secretion system protein TssB-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2964
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssB-1. New product name: TssB-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0348
|
Burkholderia cenocepacia
J2315 |
New gene name: tssA. New product name: type VI secretion system protein TssA. New gene name synonym: bcsE. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01755
|
Burkholderia cenocepacia
H111 |
New gene name: tssA. New product name: type VI secretion system protein TssA. New gene name synonym: bcsE. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28270
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tssA. New product name: type VI secretion system protein TssA. New gene name synonym: bcsE. New product name confidence: Class 1. New PubMed ID: 18316384. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BMAA0744
|
|
New gene name: tssA. New product name synonym: `. New product name confidence: Class 2. New PubMed ID: 17555434. New PubMed ID: 21300775. New genomic context: T6SS-1 gene cluster.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0523
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-6. New product name: type VI secretion system protein TssA-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2101
|
Burkholderia pseudomallei
K96243 |
New gene name: TssA-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0257
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0873
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-5. New product name: TssA-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1493
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0515
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-4. New product name: type VI secretion system protein TssA-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1902
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-4. New product name: TssA-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0180
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-3. New product name: type VI secretion system protein TssA-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0110
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-2. New product name: type VI secretion system protein TssA-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0134
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-2. New product name: TssA-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3100
|
Burkholderia pseudomallei
K96243 |
New gene name: tssA-1. New product name: type VI secretion system protein TssA-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2957
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tssA-1. New product name: TssA-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_II1884
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tseZ. New product name: type VI secretion system effector for zinc acquisition. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 28746878. New PubMed ID: 28746878. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06390
|
Burkholderia glumae
BGR1 |
New gene name: toxR. New product name: LysR type regulatory protein ToxR. New product name confidence: Class 1. New PubMed ID: 19465657. New PubMed ID: 15522077. New PubMed ID: 27070241. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: .Annotation transferred from: GenBank:AAV52816.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06330
|
Burkholderia glumae
BGR1 |
New gene name: toxJ. New product name: LuxR family transcriptional regulator ToxJ. New product name confidence: Class 1. New PubMed ID: 19465657. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: .Annotation transferred from: GenBank:AAV52815.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06350
|
Burkholderia glumae
BGR1 |
New gene name: toxI. New product name: ToxI. New product name confidence: Class 2. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: Member of the toxoflavin transporter gene cluster.Annotation transferred from: GenBank:AAV52814.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06360
|
Burkholderia glumae
BGR1 |
New gene name: toxH. New product name: ToxH. New product name confidence: Class 2. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: Member of the toxoflavin transporter gene cluster.Annotation transferred from: GenBank:AAV52813.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06370
|
Burkholderia glumae
BGR1 |
New gene name: toxG. New product name: ToxG. New product name confidence: Class 2. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: Member of the toxoflavin transporter gene cluster.Annotation transferred from: GenBank:AAV52812.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06380
|
Burkholderia glumae
BGR1 |
New gene name: toxF. New product name: ToxF. New product name confidence: Class 2. New PubMed ID: 15522077. New PubMed ID: 28665591. New comment: Member of the toxoflavin transporter gene cluster.Annotation transferred from: GenBank:AAV52811.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06440
|
Burkholderia glumae
BGR1 |
New gene name: toxE. New product name: ToxE. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52810.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06430
|
Burkholderia glumae
BGR1 |
New gene name: toxD. New product name: ToxD. New PubMed ID: 27070241. New comment: Further details in Identification of Proteins Involved in Toxin Production by Pseudomonas glumae. published in Japanese Journal of Phytopathology 64(2):75-79,January 1998..Annotation transferred from: GenBank:AAV52809.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06420
|
Burkholderia glumae
BGR1 |
New gene name: toxC. New product name: ToxC. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52808.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06410
|
Burkholderia glumae
BGR1 |
New gene name: toxB. New product name: ToxB. New product name confidence: Class 2. New PubMed ID: 27070241. New comment: Member of the toxoflavin biosynthesis gene cluster.Annotation transferred from: GenBank:AAV52807.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
bglu_2g06400
|
Burkholderia glumae
BGR1 |
New gene name: toxA. New product name: methyltransferase ToxA. New PubMed ID: 27070241. New comment: Further details in Identification of Proteins Involved in Toxin Production by Pseudomonas glumae. published in Japanese Journal of Phytopathology 64(2):75-79,January 1998..Annotation transferred from: GenBank:AAV52806.1.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BTH_II1681
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: thaA. New product name: ThaA. New PubMed ID: 29283242. New PubMed ID: 20853892. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Aug 25, 2008 |
Bcep18194_B1180
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 43% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
| Aug 25, 2008 |
Bamb_5345
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
| Aug 25, 2008 |
Bcen2424_3609
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
| Aug 25, 2008 |
Bcen_4906
|
|
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
| Aug 25, 2008 |
Bcep1808_5413
|
Burkholderia vietnamiensis
G4 |
New gene name: tftC. New product name confidence: Class 2. New alternate product name: TftC. New homology: 42% identity to TftC [B. cepacia AC1100]. New evidence reference (PMID): 12700257.
|
Literature Review. Xun, L. Washington State University, Pullman, Washington
|
| Apr 30, 2018 |
KS03_RS21965
|
Burkholderia glumae
ATCC 33617 |
New gene name: tepR. New product name: toxoflavin and eps regulator, TepR. New product name confidence: Class 2. New PubMed ID: 28036242. New comment: .Annotation transferred from: BGLU_RS04835.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BGL_RS05055
|
Burkholderia glumae
PG1 |
New gene name: tepR. New product name: toxoflavin and eps regulator, TepR. New product name confidence: Class 2. New PubMed ID: 28036242. New comment: .Annotation transferred from: BGLU_RS04835.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS25090
|
Burkholderia cenocepacia
H111 |
New gene name: tecA. New product name: type VI secretion system effector protein TecA. New product name confidence: Class 2. New subcellular localization: Extracellular (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization cross-ref: BGD:BCAM1857. New subcellular localization PMID: 27133449. New PubMed ID: 27133449. New comment: .Annotation transferred from: BGD:BCAM1857.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS12625
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tecA. New product name: type VI secretion system effector protein TecA. New product name confidence: Class 2. New subcellular localization: Extracellular (Class 2). New subcellular localization evidence code (ECO): ECO:0000250. New subcellular localization cross-ref: BGD:BCAM1857. New subcellular localization PMID: 27133449. New PubMed ID: 27133449. New comment: .Annotation transferred from: BGD:BCAM1857.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAM1857
|
Burkholderia cenocepacia
J2315 |
New gene name: tecA. New product name: type VI secretion system effector protein TecA. New product name confidence: Class 1. New subcellular localization: Extracellular (Class 1). New subcellular localization evidence code (ECO): ECO:0000112. New subcellular localization PMID: 27133449. New PubMed ID: 27133449. New comment:
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3099
|
Burkholderia pseudomallei
K96243 |
New gene name: tagN-1. New product name: type VI secretion system-associated protein TagN-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2956
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagN-1. New product name: TagN-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3108
|
Burkholderia pseudomallei
K96243 |
New gene name: tagM-1. New product name: type VI secretion system-associated protein TagM-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2965
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagM-1. New product name: TagM-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0349
|
Burkholderia cenocepacia
J2315 |
New gene name: tagL. New product name: type VI secretion system-associated protein TagL. New gene name synonym: bcsD. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster.Annotation transferred from: NA.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01760
|
Burkholderia cenocepacia
H111 |
New gene name: tagL. New product name: type VI secretion system-associated protein TagL. New gene name synonym: bcsD. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28275
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tagL. New product name: type VI secretion system-associated protein TagL. New gene name synonym: bcsD. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 21178498. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0096
|
Burkholderia pseudomallei
K96243 |
New gene name: tagL-2. New product name: type VI secretion system-associated protein TagL-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0120
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagL-2. New product name: TagL-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0175
|
Burkholderia pseudomallei
K96243 |
New gene name: tagK-3. New product name: type VI secretion system-associated protein TagK-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0115
|
Burkholderia pseudomallei
K96243 |
New gene name: tagK-2. New product name: type VI secretion system-associated protein TagK-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0139
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagK-2. New product name: TagK-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0176
|
Burkholderia pseudomallei
K96243 |
New gene name: tagJ-3. New product name: type VI secretion system-associated protein TagJ-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0114
|
Burkholderia pseudomallei
K96243 |
New gene name: tagJ-2. New product name: type VI secretion system-associated protein TagJ-2. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-2 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-5 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0138
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagJ-2. New product name: TagJ-2. New pathway: T6SS-2 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 2 (T6SS-2).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0530
|
Burkholderia pseudomallei
K96243 |
New gene name: tagI-6. New product name: type VI secretion system-associated protein TagI-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2108
|
Burkholderia pseudomallei
K96243 |
New gene name: TagI-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0250
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagI-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0531
|
Burkholderia pseudomallei
K96243 |
New gene name: tagH-6. New product name: type VI secretion system-associated protein TagH-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2109
|
Burkholderia pseudomallei
K96243 |
New gene name: TagH-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BCAL0350
|
Burkholderia cenocepacia
J2315 |
New gene name: tagF. New product name: type VI secretion system-associated protein TagF. New gene name synonym: bcsC. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 22411981. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster.Annotation transferred from: NA.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
I35_RS01765
|
Burkholderia cenocepacia
H111 |
New gene name: tagF. New product name: type VI secretion system-associated protein TagF. New gene name synonym: bcsC. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 22411981. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BURCENK562V_RS28280
|
Burkholderia cenocepacia
K56-2Valvano |
New gene name: tagF. New product name: type VI secretion system-associated protein TagF. New gene name synonym: bcsC. New product name confidence: Class 2. New PubMed ID: 18316384. New PubMed ID: 22411981. New PubMed ID: 26364149. New comment: Part of the T6SS gene cluster
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0525
|
Burkholderia pseudomallei
K96243 |
New gene name: tagF-6. New product name: type VI secretion system-associated protein TagF-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2103
|
Burkholderia pseudomallei
K96243 |
New gene name: TagF-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0255
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagF-6. New pathway: T6SS-6 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 6 (T6SS-6).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSL3098
|
Burkholderia pseudomallei
K96243 |
New gene name: tagF-1. New product name: type VI secretion system-associated protein TagF-1. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-1 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-1 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_I2955
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagF-1. New product name: TagF-1. New pathway: T6SS-1 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 1 (T6SS-1).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0524
|
Burkholderia pseudomallei
K96243 |
New gene name: tagE-6. New product name: type VI secretion system-associated protein TagE-6. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-6 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-3 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS2102
|
Burkholderia pseudomallei
K96243 |
New gene name: TagE-6. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II0859
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagD-5. New product name: TagD-5. New pathway: T6SS-5 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 5 (T6SS-5).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 10, 2015 |
BPSS1507
|
Burkholderia pseudomallei
K96243 |
New gene name: tagD-5. New product name confidence: Class 2. New PubMed ID: 17660433.
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0528
|
Burkholderia pseudomallei
K96243 |
New gene name: tagD-4. New product name: type VI secretion system-associated protein TagD-4. New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-4 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-2 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|
| Jan 25, 2011 |
BTH_II1889
|
Burkholderia thailandensis
E264 ATCC 700388 |
New gene name: tagD-4. New product name: TagD-4. New pathway: T6SS-4 Type VI Secretion System. New GO accession: GO:0033103 [IGC]. New evidence reference (PMID): 20865170. New genomic context: type VI secretion system gene cluster 4 (T6SS-4).
|
Literature review. Geoffrey L. Winsor (Brinkman Lab). Simon Fraser University, Canada
|
| Apr 30, 2018 |
BPSS0185
|
Burkholderia pseudomallei
K96243 |
New gene name: tagD-3. New product name: type VI secretion system-associated protein TagD-3 (T6SS-4). New product name confidence: Class 2. New PubMed ID: 17660433. New PubMed ID: 22007185. New PubMed ID: 17555434. New comment: Gene is part of a cluster known as the type VI secretion system gene cluster tss-3 used in much of the early P. pseudomallei literature (PMID:17660433) but later referred to as T6SS-4 cluster later (PMID:22007185)
|
Literature review. Geoff Winsor, Brinkman Lab, Simon Fraser University, Canada
|