Burkholderia cenocepacia J2315, BCAL0350 (tagF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia cenocepacia J2315
Locus Tag
BCAL0350
NCBI Locus TagQU43_RS38285
Name
tagF
Synonym: bcsC
Replicon chromosome 1
Genomic location 377950 - 378939 (- strand)
CommentPart of the T6SS gene cluster

Cross-References

RefSeq WP_006483243.1
GI 206558756
Entrez 6930894
GI 206558756
INSDC CAR50660.1
NCBI Locus Tag QU43_RS38285
NCBI Old Locus Tag BCAL0350
RefSeq WP_006483243.1,GeneID
UniParc UPI00017B912E
UniProtKB Acc B4E6S2
UniProtKB ID B4E6S2_BURCJ
UniRef100 UniRef100_B4E6S2
UniRef50 UniRef50_D8N088
UniRef90 UniRef90_B4E6S2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system-associated protein TagF
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) -6.11
Kyte-Doolittle Hydrophobicity Value 0.056
Molecular Weight (kDa) 36149.1
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000377 (643 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL0350
Search term: tagF

References

A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA.
Infect Immun. 2008 May;76(5):1979-91.
PubMed ID: 18316384
PubMed ID: 22411981
PubMed ID: 26364149