Strain Overview | |
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Organism Name | Burkholderia mallei ATCC 23344 |
Species | Burkholderia mallei |
Strain | ATCC 23344 |
Description/Title | Sample from Burkholderia mallei ATCC 23344 |
Annotated Genes | 5091 |
Partial Genes |
Host Information | |
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Host Species Taxonomic Name |
Geographic Location |
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Sample Provider | |
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Name | |
johnston@ncbi.nlm.nih.gov | |
Institution | |
Date Collected |
Database | Scheme | Sequence Type | Alleles | |
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Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). |
Assembly | |
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Assembly DB |
RefSeq
|
Assembly Accession | Assembly Status | latest |
Scaffolds | |
Contigs | |
Contig N50 | |
Assembly Level | Complete Genome |
Percent GC |
Cross-References | |
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NCBI BioSample Accession | SAMN02603987 |
NCBI Taxonomy ID | 243160 |
NCBI Bioprojects |
Related Data | |
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Additional Genome Project Info | |
Sequencing Information | |
Genome Assembly Information |
Genome Browsers* | |
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Burkholderia mallei ATCC 23344 chromosome 1, complete sequence. | |
Burkholderia mallei ATCC 23344 chromosome 2, complete sequence. |
Feature | Count |
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gene | 5091 |
CDS | 5022 |
pseudo | 415 |
tRNA | 56 |
rRNA | 10 |
misc_RNA | 3 |
Localization | Count |
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Cytoplasmic | 2235 |
Cytoplasmic Membrane | 917 |
Periplasmic | 143 |
Outer Membrane | 104 |
Extracellular | 70 |
Unknown | 1486 |
Unknown (This protein may have multiple localization sites) | 140 |
Flagellar | 23 |
Fimbrial | 4 |
Host Associated | 2 |
T3SS | 2 |
Name | Length | GC | |
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Burkholderia mallei ATCC 23344 chromosome 1, complete sequence. | 3510148 bp | 68.2% |
Replicon details
|
Burkholderia mallei ATCC 23344 chromosome 2, complete sequence. | 2325379 bp | 69.0% |
Replicon details
|
Genomic | ORF DNA | Intergenic | Amino Acid |
TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |