Burkholderia pseudomallei K96243, BPSS1720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1720
Name
Replicon chromosome 2
Genomic location 2358929 - 2359345 (- strand)

Cross-References

RefSeq YP_111726.1
GI 53722741
Entrez 3096507
GI 53722741
INSDC CAH39194.1
NCBI Locus Tag BPSS1720
RefSeq YP_111726.1,GeneID
UniParc UPI000043BDD7
UniProtKB Acc Q63JJ6
UniProtKB ID Q63JJ6_BURPS
UniRef100 UniRef100_A0A097XKZ1
UniRef50 UniRef50_A6SY49
UniRef90 UniRef90_Q2T7J0

Product

Feature Type CDS
Coding Frame 1
Product Name
succinate dehydrogenase cytochrome b-556 subunit
Synonyms
Evidence for Translation
Charge (pH 7) 7.91
Kyte-Doolittle Hydrophobicity Value 0.657
Molecular Weight (kDa) 15645.6
Isoelectric Point (pI) 10.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 162 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003066 (656 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1720

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268