Burkholderia pseudomallei K96243, BPSS1720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1300.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000178
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000104 succinate dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000178
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01127
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045281 succinate dehydrogenase complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000178
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01130 Biosynthesis of antibiotics 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00190 Oxidative phosphorylation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01120 Microbial metabolism in diverse environments 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00020 Citrate cycle (TCA cycle) 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00650 Butanoate metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03499 SQR_TypeC_SdhC 24 132 5.90568E-31
Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit 22 129 1.6E-27
TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit IPR014314 Succinate dehydrogenase, cytochrome b556 subunit 23 131 3.2E-35
PIRSF PIRSF000178 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit 4 135 1.5E-31
SUPERFAMILY SSF81343 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit 2 134 6.7E-31
Gene3D G3DSA:1.20.1300.10 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit 2 135 1.2E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.