Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS29080 (vioA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest |
| Locus Tag |
BURCENK562V_RS29080
|
| NCBI Old Locus Tag | BURCENK562V_C5747 |
| Name |
vioA
|
| Replicon | ctg7180000002940C |
| Genomic location | 103504 - 104646 (+ strand) |
| Comment | Belongs to the O antigen biosynthesis gene cluster |
Cross-References
| RefSeq | WP_006485127.1 |
| GI | 493531124 |
| GI | 493531124 |
| NCBI Locus Tag | BURCENK562V_RS29080 |
| NCBI Old Locus Tag | BURCENK562V_C5747 |
| RefSeq | WP_006485127.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
nucleotide sugar aminotransferase VioA
|
| Synonyms |
aminotransferase DegT |
| Evidence for Translation | |
| Charge (pH 7) | -2.12 |
| Kyte-Doolittle Hydrophobicity Value | 0.038 |
| Molecular Weight (kDa) | 41867.7 |
| Isoelectric Point (pI) | 6.70 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG015122 (29 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BURCENK562V_RS29080
Search term: vioA
Search term: nucleotide sugar aminotransferase VioA
|
Human Homologs
References
|
Reconstitution of O-specific lipopolysaccharide expression in Burkholderia cenocepacia strain J2315, which is associated with transmissible infections in patients with cystic fibrosis.
Ortega X, Hunt TA, Loutet S, Vinion-Dubiel AD, Datta A, Choudhury B, Goldberg JB, Carlson R, Valvano MA
J Bacteriol 2005 Feb;187(4):1324-33
PubMed ID: 15687196
|