Burkholderia ambifaria MC40-6, BamMC406_2576 (deh4p)

Gene Feature Overview

Strain	Burkholderia ambifaria MC40-6 GCF_000019925.1|latest
Locus Tag	BamMC406_2576
NCBI Locus Tag	BAMMC406_RS13040
Name	deh4p
Replicon	chromosome 1
Genomic location	2859930 - 2861588 (+ strand)

Cross-References

RefSeq	WP_012364631.1
GI	172061617
Entrez	6178955
GI	172061617
INSDC	ACB65053.1
NCBI Locus Tag	BAMMC406_RS13040
NCBI Old Locus Tag	BamMC406_2576
RefSeq	WP_012364631.1
UniParc	UPI0000E91597
UniProtKB Acc	B1YVZ2
UniProtKB ID	B1YVZ2_BURA4
UniRef100	UniRef100_B1YVZ2
UniRef50	UniRef50_Q7CWX7
UniRef90	UniRef90_A1V6W2

Product

Feature Type	CDS
Coding Frame	1
Product Name	general substrate transporter Product Name Confidence: Class 2
Synonyms	putative haloacid permease, Deh4p
Evidence for Translation
Charge (pH 7)	13.09
Kyte-Doolittle Hydrophobicity Value	0.628
Molecular Weight (kDa)	59110.8
Isoelectric Point (pI)	9.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 344 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG002512 (652 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BamMC406_2576 Search term: deh4p Search term: general substrate transporter

Human Homologs

References

Isolation and characterization of a novel haloacid permease from Burkholderia cepacia MBA4. Yu M, Faan YW, Chung WY, Tsang JS Appl Environ Microbiol 2007 Aug;73(15):4874-80 PubMed ID: 17545323