Strain |
Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest |
Locus Tag |
BPSL3220
|
Name |
rpoC
|
Replicon | chromosome 1 |
Genomic location | 3816188 - 3820426 (- strand) |
RefSeq | YP_109814.1 |
GI | 53720828 |
Entrez | 3094314 |
GI | 53720828 |
INSDC | CAH37231.1 |
NCBI Locus Tag | BPSL3220 |
RefSeq | YP_109814.1,GeneID |
UniParc | UPI000043B685 |
UniProtKB Acc | Q63Q04 |
UniProtKB ID | RPOC_BURPS |
UniRef100 | UniRef100_A3P0C4 |
UniRef50 | UniRef50_A9GRB4 |
UniRef90 | UniRef90_Q13TG3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DNA-directed RNA polymerase subunit beta'
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -1.93 |
Kyte-Doolittle Hydrophobicity Value | -0.228 |
Molecular Weight (kDa) | 155990.9 |
Isoelectric Point (pI) | 6.80 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera
|
Burkholderia Ortholog Group |
BG000251 (655 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BPSL3220
Search term: rpoC
Search term: DNA-directed RNA polymerase subunit beta'
|
Ensembl
97, assembly
GRCh38.p12
|
RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]
E-value:
9.3e-44
Percent Identity:
22.6
|
Ensembl
97, assembly
GRCh38.p12
|
RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]
E-value:
9.3e-44
Percent Identity:
22.6
|
Ensembl
97, assembly
GRCh38.p12
|
RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]
E-value:
9.3e-44
Percent Identity:
22.6
|
Ensembl
97, assembly
GRCh38.p12
|
RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]
E-value:
9.3e-44
Percent Identity:
22.6
|
Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268
|