Burkholderia cenocepacia J2315, BCAL0024 (gidA)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0024
NCBI Locus Tag	QU43_RS36610
Name	gidA
Replicon	chromosome 1
Genomic location	26985 - 28955 (+ strand)

Cross-References

RefSeq	WP_006482726.1
GI	206558428
Entrez	6930695
GI	206558428
INSDC	CAR50330.1
NCBI Locus Tag	QU43_RS36610
NCBI Old Locus Tag	BCAL0024
RefSeq	WP_006482726.1,GeneID
UniParc	UPI00017B90EC
UniProtKB Acc	B4E581
UniProtKB ID	MNMG_BURCJ
UniRef100	UniRef100_B4E581
UniRef50	UniRef50_Q9Z7T7
UniRef90	UniRef90_Q63PG8

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Synonyms
Evidence for Translation
Charge (pH 7)	-6.77
Kyte-Doolittle Hydrophobicity Value	-0.357
Molecular Weight (kDa)	71905.7
Isoelectric Point (pI)	6.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 509 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000079 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0024 Search term: gidA Search term: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000419561 mitochondrial tRNA translation optimization 1 [Source:HGNC Symbol;Acc:HGNC:19261] E-value: 5.5e-140 Percent Identity: 44.0

References