Burkholderia glumae BGR1, bglu_1g00500 (pidR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51755
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51755
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51755
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 135 221 4.33862E-24
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 4 116 4.26254E-37
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 149 221 5.3E-20
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 148 221 4.7E-21
Gene3D G3DSA:3.40.50.2300 1 122 1.5E-37
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 127 228 2.2E-23
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 127 223 30.248
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 2 116 41.353
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 1 125 9.25E-38
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 124 221 4.54E-22
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 1 112 1.2E-36
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 113 1.2E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.