Burkholderia cenocepacia J2315, BCAM2141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044010 single-species biofilm formation
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042626 ATPase-coupled transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF90123
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008233 peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02010 ABC transporters 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 477 713 4.5E-67
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 482 717 21.529
MobiDBLite mobidb-lite consensus disorder prediction 709 739 -
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like 503 648 4.0E-29
TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase IPR017750 ATPase, type I secretion system 18 710 6.9E-220
ProSiteProfiles PS50990 Peptidase family C39 domain profile. IPR005074 Peptidase C39, bacteriocin processing 10 133 11.349
Gene3D G3DSA:3.90.70.10 16 136 1.4E-10
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 475 706 1.61E-63
Gene3D G3DSA:1.20.1560.10 IPR036640 ABC transporter type 1, transmembrane domain superfamily 156 467 4.2E-48
Coils Coil 738 739 -
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 620 634 -
SUPERFAMILY SSF90123 IPR036640 ABC transporter type 1, transmembrane domain superfamily 155 468 3.66E-46
SMART SM00382 IPR003593 AAA+ ATPase domain 508 694 8.2E-15
Pfam PF00664 ABC transporter transmembrane region IPR011527 ABC transporter type 1, transmembrane domain 174 430 6.8E-23
CDD cd18587 ABC_6TM_LapB_like 164 456 1.64007E-118
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile. IPR011527 ABC transporter type 1, transmembrane domain 172 448 37.903

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.