Burkholderia cenocepacia J2315, BCAM2140

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0044010	single-species biofilm formation	IGC Inferred from Genomic Context	ECO:0000177 genomic context evidence
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00543	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00543	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			370	390	7.8E-42
Coils	Coil				185	205	-
Gene3D	G3DSA:2.40.30.170				272	362	4.9E-15
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			67	87	7.8E-42
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			25	48	7.8E-42
Coils	Coil				96	116	-
Gene3D	G3DSA:2.40.50.100				54	120	7.3E-6
Gene3D	G3DSA:2.40.50.100				213	271	4.9E-15
ProSitePatterns	PS00543	HlyD family secretion proteins signature.	IPR006144	Secretion protein HlyD, conserved site	355	377	-
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			355	370	7.8E-42
Gene3D	G3DSA:1.10.287.470				150	212	4.9E-15
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			285	309	7.8E-42
Pfam	PF13437	HlyD family secretion protein			239	358	4.0E-20
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			252	273	7.8E-42
PRINTS	PR01490	Gram-negative bacterial RTX secretion protein D signature			309	332	7.8E-42
Coils	Coil				147	167	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.