Burkholderia cenocepacia J2315, BCAM1992

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50931	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50931	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	4	92	2.5E-28
SUPERFAMILY	SSF53850				83	265	4.52E-23
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	88	259	7.7E-22
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	6	64	3.4E-23
Gene3D	G3DSA:3.40.190.10				98	266	1.6E-34
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	4	112	3.21E-27
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	42	53	3.2E-8
Gene3D	G3DSA:3.40.190.10				169	262	1.6E-34
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	4	61	29.641
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	32	42	3.2E-8
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	21	32	3.2E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.