Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0045893 | positive regulation of transcription, DNA-templated | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF02311
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF12833
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSitePatterns | PS00041 | Bacterial regulatory proteins, araC family signature. | IPR018062 | HTH domain AraC-type, conserved site | 216 | 259 | - |
SMART | SM00342 | IPR018060 | DNA binding HTH domain, AraC-type | 181 | 263 | 4.2E-29 | |
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 36 | 152 | 3.2E-9 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 187 | 264 | 1.5E-21 |
Gene3D | G3DSA:1.10.10.60 | 218 | 268 | 3.2E-10 | |||
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 232 | 247 | 2.8E-5 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 247 | 263 | 2.8E-5 |
Gene3D | G3DSA:2.60.120.10 | IPR014710 | RmlC-like jelly roll fold | 37 | 106 | 9.7E-6 | |
ProSiteProfiles | PS01124 | Bacterial regulatory proteins, araC family DNA-binding domain profile. | IPR018060 | DNA binding HTH domain, AraC-type | 164 | 265 | 25.474 |
Gene3D | G3DSA:1.10.10.60 | 163 | 217 | 1.4E-12 | |||
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 218 | 263 | 1.16E-8 | |
SUPERFAMILY | SSF51182 | IPR011051 | RmlC-like cupin domain superfamily | 42 | 217 | 1.42E-11 |