Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0009244 | lipopolysaccharide core region biosynthetic process | Inferred from Genomic Context | ECO:0000177 genomic context evidence |
||
Biological Process | GO:0009244 | lipopolysaccharide core region biosynthetic process | Inferred from Genomic Context | ECO:0000317 genomic context evidence used in manual assertion |
19525227 | Reviewed by curator |
Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016887 | ATPase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1560.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0034040 | ATPase-coupled lipid transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PS51239
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0042626 | ATPase-coupled transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0016021 | integral component of membrane |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1560.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | bcj02010 | ABC transporters | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Coils | Coil | 193 | 220 | - | |||
SUPERFAMILY | SSF90123 | IPR036640 | ABC transporter type 1, transmembrane domain superfamily | 24 | 339 | 9.16E-74 | |
Gene3D | G3DSA:3.40.50.300 | 344 | 594 | 4.2E-92 | |||
ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | IPR003439 | ABC transporter-like | 353 | 588 | 25.85 |
SMART | SM00382 | IPR003593 | AAA+ ATPase domain | 380 | 565 | 2.4E-21 | |
Pfam | PF00005 | ABC transporter | IPR003439 | ABC transporter-like | 371 | 519 | 7.3E-33 |
TIGRFAM | TIGR02203 | MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA | IPR011917 | ABC transporter, lipid A export, MsbA | 24 | 592 | 2.2E-237 |
Gene3D | G3DSA:1.20.1560.10 | IPR036640 | ABC transporter type 1, transmembrane domain superfamily | 7 | 340 | 4.5E-73 | |
CDD | cd18552 | ABC_6TM_MsbA_like | 37 | 329 | 2.50792E-97 | ||
ProSitePatterns | PS00211 | ABC transporters family signature. | IPR017871 | ABC transporter, conserved site | 491 | 505 | - |
Pfam | PF00664 | ABC transporter transmembrane region | IPR011527 | ABC transporter type 1, transmembrane domain | 39 | 309 | 1.3E-43 |
SUPERFAMILY | SSF52540 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 344 | 590 | 1.07E-90 | |
ProSiteProfiles | PS51239 | Lipid A export ATP-binding/permease protein msbA family profile. | IPR011917 | ABC transporter, lipid A export, MsbA | 18 | 590 | 172.73 |
ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | IPR011527 | ABC transporter type 1, transmembrane domain | 38 | 321 | 49.128 |