Burkholderia cenocepacia J2315, BCAL1676

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071236 cellular response to antibiotic
IGI
Inferred from Genetic Interaction 		ECO:0000011
genetic interaction evidence		 19761586 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01501 beta-Lactam resistance 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 77 265 3.2E-22
TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family IPR010131 RND efflux system, outer membrane lipoprotein, NodT 18 475 7.8E-117
Coils Coil 301 321 -
Gene3D G3DSA:2.20.200.10 114 364 4.4E-131
SUPERFAMILY SSF56954 8 477 2.62E-104
Gene3D G3DSA:1.20.1600.10 68 476 4.4E-131
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 291 473 1.8E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.