Burkholderia dolosa AU0158, AK34_RS06465 (bceN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0045226 extracellular polysaccharide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: BGD:Bcep1808_4472
 ECO:0000250
sequence similarity evidence used in manual assertion		 19948863 Reviewed by curator
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019673 GDP-mannose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00520 Amino sugar and nucleotide sugar metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-L-fucose biosynthesis I (from GDP-D-mannose) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-mycosamine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-6-deoxy-D-talose biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-L-colitose biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc GDP-D-perosamine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00051 Fructose and mannose metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd05260 GDP_MD_SDR_e 7 339 1.14257E-172
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 9 334 5.3E-137
Gene3D G3DSA:3.40.50.720 8 325 1.1E-147
Gene3D G3DSA:3.90.25.10 191 339 1.1E-147
Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. IPR006368 GDP-mannose 4,6-dehydratase 6 344 52.746
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 6 338 2.22E-74
TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase IPR006368 GDP-mannose 4,6-dehydratase 6 340 4.4E-144

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.