Burkholderia cenocepacia MC0-3, Bcenmc03_2645 (htrA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004252 | serine-type endopeptidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00228
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00228
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006508 | proteolysis |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006508 | proteolysis |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004252 | serine-type endopeptidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00228 | IPR001478 | PDZ domain | 297 | 379 | 3.3E-18 | |
| Gene3D | G3DSA:2.30.42.10 | 292 | 398 | 4.2E-29 | |||
| Pfam | PF13365 | Trypsin-like peptidase domain | 125 | 258 | 3.4E-36 | ||
| Gene3D | G3DSA:2.40.10.120 | 53 | 291 | 4.5E-81 | |||
| Gene3D | G3DSA:2.30.42.10 | 407 | 490 | 4.4E-18 | |||
| SUPERFAMILY | SSF50494 | IPR009003 | Peptidase S1, PA clan | 52 | 288 | 9.34E-66 | |
| Pfam | PF13180 | PDZ domain | IPR001478 | PDZ domain | 298 | 388 | 2.4E-19 |
| ProSiteProfiles | PS50106 | PDZ domain profile. | IPR001478 | PDZ domain | 393 | 483 | 12.868 |
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 195 | 219 | 1.0E-52 |
| SUPERFAMILY | SSF50156 | IPR036034 | PDZ superfamily | 255 | 379 | 1.71E-27 | |
| CDD | cd00987 | PDZ_serine_protease | 407 | 490 | 1.73191E-19 | ||
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 251 | 268 | 1.0E-52 |
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 337 | 349 | 1.0E-52 |
| SUPERFAMILY | SSF50156 | IPR036034 | PDZ superfamily | 407 | 490 | 5.39E-18 | |
| CDD | cd00987 | PDZ_serine_protease | 297 | 386 | 2.66678E-26 | ||
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 134 | 146 | 1.0E-52 |
| Pfam | PF17820 | PDZ domain | IPR041489 | PDZ domain 6 | 434 | 478 | 1.3E-14 |
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 155 | 175 | 1.0E-52 |
| SMART | SM00228 | IPR001478 | PDZ domain | 407 | 483 | 1.2E-11 | |
| ProSiteProfiles | PS50106 | PDZ domain profile. | IPR001478 | PDZ domain | 288 | 379 | 15.682 |
| PRINTS | PR00834 | HtrA/DegQ protease family signature | IPR001940 | Peptidase S1C | 229 | 246 | 1.0E-52 |
| TIGRFAM | TIGR02037 | degP_htrA_DO: peptidase Do | IPR011782 | Peptidase S1C, Do | 55 | 488 | 1.3E-153 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.