Burkholderia thailandensis E264 ATCC 700388, BTH_II0872

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
TAS
Traceable Author Statement 		ECO:0000304
traceable author statement used in manual assertion		 20865170 Reviewed by curator
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 145 234 1.37241E-26
Gene3D G3DSA:3.40.50.2300 1 126 1.5E-30
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 10 120 4.28241E-30
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 5 131 7.83E-33
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 7 117 2.5E-30
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 161 234 7.0E-20
ProSiteProfiles PS51755 OmpR/PhoB-type DNA-binding domain profile. IPR001867 OmpR/PhoB-type DNA-binding domain 137 236 34.478
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 8 121 33.464
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 134 240 2.4E-30
SMART SM00862 IPR001867 OmpR/PhoB-type DNA-binding domain 159 234 2.7E-21
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 9 117 4.9E-20
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 140 234 2.69E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.