Burkholderia thailandensis E264 ATCC 700388, BTH_II0267 (rhs-6)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Inferred from Genomic Context | ECO:0000177 genomic context evidence |
||
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Traceable Author Statement | ECO:0000304 traceable author statement used in manual assertion |
20865170 | Reviewed by curator |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 603 | 642 | 4.0E-9 |
| Gene3D | G3DSA:2.180.10.10 | 918 | 1227 | 1.7E-10 | |||
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 813 | 853 | 3.7E-10 |
| Gene3D | G3DSA:3.90.930.1 | 702 | 833 | 1.7E-9 | |||
| Gene3D | G3DSA:2.180.10.10 | 1271 | 1400 | 9.8E-25 | |||
| TIGRFAM | TIGR03696 | Rhs_assc_core: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 1324 | 1400 | 6.5E-22 |
| CDD | cd14740 | PAAR_4 | 4 | 37 | 4.06051E-6 | ||
| SUPERFAMILY | SSF69322 | 598 | 931 | 1.31E-8 | |||
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 687 | 727 | 4.6E-7 |
| Coils | Coil | 76 | 96 | - | |||
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 583 | 623 | 9.2E-5 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 730 | 768 | 0.003 |
| Gene3D | G3DSA:3.90.930.1 | 564 | 701 | 3.0E-13 | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1221 | 1248 | - | ||
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 1298 | 1328 | 2.4E-7 |
| Coils | Coil | 1539 | 1539 | - | |||
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 708 | 736 | 4.2E-6 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 708 | 745 | 4.5E-7 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 645 | 683 | 2.8E-6 |
| TIGRFAM | TIGR01643 | YD_repeat_2x: YD repeat (two copies) | IPR006530 | YD repeat | 1039 | 1078 | 3.0E-4 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.