Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS01124 | Bacterial regulatory proteins, araC family DNA-binding domain profile. | IPR018060 | DNA binding HTH domain, AraC-type | 21 | 119 | 25.169 |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 70 | 121 | 6.27E-10 | |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 101 | 117 | 3.9E-5 |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 20 | 63 | 8.96E-6 | |
ProSitePatterns | PS00041 | Bacterial regulatory proteins, araC family signature. | IPR018062 | HTH domain AraC-type, conserved site | 71 | 113 | - |
Gene3D | G3DSA:3.20.80.10 | IPR011256 | Regulatory factor, effector binding domain superfamily | 138 | 293 | 3.3E-42 | |
SMART | SM00342 | IPR018060 | DNA binding HTH domain, AraC-type | 34 | 117 | 1.0E-18 | |
Pfam | PF06445 | GyrI-like small molecule binding domain | IPR029442 | GyrI-like small molecule binding domain | 138 | 293 | 8.4E-33 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 86 | 101 | 3.9E-5 |
Gene3D | G3DSA:1.10.10.60 | 15 | 123 | 1.4E-22 | |||
SUPERFAMILY | SSF55136 | IPR011256 | Regulatory factor, effector binding domain superfamily | 139 | 293 | 4.19E-37 | |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 40 | 118 | 5.5E-16 |
SMART | SM00871 | IPR010499 | Bacterial transcription activator, effector binding | 138 | 293 | 7.2E-40 |