Burkholderia cenocepacia J2315, BCAL2927 (rimM)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL2927
NCBI Locus Tag	QU43_RS51280
Name	rimM
Replicon	chromosome 1
Genomic location	3206371 - 3207051 (- strand)

Cross-References

RefSeq	YP_002232027.1
GI	206561262
Entrez	6934197
GI	206561262
INSDC	CAR53226.1
NCBI Locus Tag	QU43_RS51280
NCBI Old Locus Tag	BCAL2927
RefSeq	YP_002232027.1
UniParc	UPI00017B96EE
UniProtKB Acc	B4EAN5
UniProtKB ID	B4EAN5_BURCJ
UniRef100	UniRef100_B4EAN5
UniRef50	UniRef50_Q0BH68
UniRef90	UniRef90_B4EAN5

Product

Feature Type	CDS
Coding Frame	1
Product Name	16S rRNA-processing protein RimM
Synonyms
Evidence for Translation
Charge (pH 7)	-3.04
Kyte-Doolittle Hydrophobicity Value	-0.262
Molecular Weight (kDa)	24584.5
Isoelectric Point (pI)	5.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543 Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 380 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000912 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL2927 Search term: rimM Search term: 16S rRNA-processing protein RimM

Human Homologs

References