Burkholderia cenocepacia J2315, pBCA095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01068
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003910 DNA ligase (ATP) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01068
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01068
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01068
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50160 ATP-dependent DNA ligase family profile. IPR012310 DNA ligase, ATP-dependent, central 117 244 11.7
CDD cd07906 Adenylation_DNA_ligase_LigD_LigC 26 210 5.72966E-78
TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain IPR014146 DNA ligase D, ligase domain 28 329 8.2E-93
Pfam PF04679 ATP dependent DNA ligase C terminal region IPR012309 DNA ligase, ATP-dependent, C-terminal 228 323 6.5E-23
CDD cd07971 OBF_DNA_ligase_LigD 212 328 3.74644E-47
MobiDBLite mobidb-lite consensus disorder prediction 315 343 -
Gene3D G3DSA:3.30.470.30 51 166 1.9E-47
SUPERFAMILY SSF56091 26 209 1.18E-47
Gene3D G3DSA:2.40.50.140 211 331 1.9E-33
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 210 320 3.08E-23
Pfam PF01068 ATP dependent DNA ligase domain IPR012310 DNA ligase, ATP-dependent, central 41 209 8.5E-23
Gene3D G3DSA:3.30.1490.70 36 207 1.9E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.