Burkholderia cenocepacia J2315, BCAS0707

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06170	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50110	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	180	192	1.8E-12
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	150	204	3.0862E-18
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	164	180	1.8E-12
SMART	SM00448		IPR001789	Signal transduction response regulator, receiver domain	12	123	3.8E-21
SMART	SM00421		IPR000792	Transcription regulator LuxR, C-terminal	147	204	1.5E-21
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	14	123	2.0E-22
Gene3D	G3DSA:3.40.50.2300				7	138	5.9E-44
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	149	201	4.1E-20
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	141	206	6.4E-18
CDD	cd00156	REC	IPR001789	Signal transduction response regulator, receiver domain	22	127	5.16646E-23
ProSiteProfiles	PS50043	LuxR-type HTH domain profile.	IPR000792	Transcription regulator LuxR, C-terminal	143	208	29.019
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	150	164	1.8E-12
SUPERFAMILY	SSF52172		IPR011006	CheY-like superfamily	14	151	1.57E-28
ProSitePatterns	PS00622	LuxR-type HTH domain signature.	IPR000792	Transcription regulator LuxR, C-terminal	164	191	-
ProSiteProfiles	PS50110	Response regulatory domain profile.	IPR001789	Signal transduction response regulator, receiver domain	13	127	33.128
SUPERFAMILY	SSF46894		IPR016032	Signal transduction response regulator, C-terminal effector	141	209	6.8E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.