Burkholderia cenocepacia J2315, BCAS0415

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.160.10 IPR023614 Porin domain superfamily 15 394 6.5E-85
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 327 351 4.8E-9
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 153 170 4.8E-9
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 13 347 5.6E-44
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 53 78 4.8E-9
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 22 394 1.19079E-93
SUPERFAMILY SSF56935 21 394 8.37E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.