Burkholderia cenocepacia J2315, BCAS0402

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	11	102	1.9E-27
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	11	68	32.303
Gene3D	G3DSA:3.40.190.290				103	308	1.5E-52
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	13	72	2.9E-22
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	39	49	9.2E-10
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	9	121	3.23E-27
CDD	cd08440	PBP2_LTTR_like_4			102	298	6.34813E-84
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	28	39	9.2E-10
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	101	301	5.4E-47
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	49	60	9.2E-10
SUPERFAMILY	SSF53850				101	304	9.19E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.