Burkholderia cenocepacia J2315, BCAS0399 (citH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 98 114 -
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 38 445 2.62E-64
Gene3D G3DSA:1.20.1250.20 35 450 5.4E-56
MobiDBLite mobidb-lite consensus disorder prediction 1 29 -
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 38 448 36.942
ProSitePatterns PS00217 Sugar transport proteins signature 2. IPR005829 Sugar transporter, conserved site 148 173 -
TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein IPR004736 MFS transporter, metabolite:H symporter 45 435 1.7E-133
CDD cd17368 MFS_CitA 39 444 4.41601E-170
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 45 397 6.9E-24
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 316 333 -
MobiDBLite mobidb-lite consensus disorder prediction 1 30 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.