Burkholderia cenocepacia J2315, BCAS0378

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50043
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 445 461 3.7E-11
Gene3D G3DSA:1.10.3210.10 232 414 1.9E-23
Gene3D G3DSA:1.10.3210.10 108 212 1.7E-7
SMART SM00421 IPR000792 Transcription regulator LuxR, C-terminal 428 485 6.9E-18
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 416 490 2.04E-17
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 430 484 1.2E-14
SUPERFAMILY SSF109604 258 393 2.16E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 431 445 3.7E-11
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 461 473 3.7E-11
Pfam PF13487 HD domain 304 364 3.3E-7
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 431 485 2.35385E-13
ProSiteProfiles PS51832 HD-GYP domain profile. IPR037522 HD-GYP domain 222 426 16.03
ProSiteProfiles PS50043 LuxR-type HTH domain profile. IPR000792 Transcription regulator LuxR, C-terminal 424 489 23.908
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 421 491 2.3E-19
CDD cd00077 HDc IPR003607 HD/PDEase domain 255 366 5.27367E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.