Burkholderia cenocepacia J2315, BCAS0373

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
ProSitePatterns	PS00356	LacI-type HTH domain signature.			15	33	-
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	68	325	1.47E-52
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	13	69	3.16E-14
Gene3D	G3DSA:3.40.50.2300				72	317	2.1E-69
SMART	SM00354		IPR000843	LacI-type HTH domain	12	81	1.5E-22
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	17	66	5.9226E-17
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	13	66	30.706
Pfam	PF13377	Periplasmic binding protein-like domain			178	344	4.7E-28
CDD	cd01575	PBP1_GntR			71	344	2.33606E-128
Gene3D	G3DSA:1.10.260.40				6	68	4.7E-19
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	15	56	1.1E-15
Gene3D	G3DSA:3.40.50.2300				169	301	2.1E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.