Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0019632 | shikimate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0050661 | NADP binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0055114 | oxidation-reduction process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00507
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG (InterPro) | 00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
|
KEGG | bcj01110 | Biosynthesis of secondary metabolites | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
MetaCyc | chorismate biosynthesis from 3-dehydroquinate | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
KEGG | bcj01230 | Biosynthesis of amino acids | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj01130 | Biosynthesis of antibiotics | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | bcj00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR00507 | aroE: shikimate dehydrogenase | IPR011342 | Shikimate dehydrogenase | 4 | 272 | 4.5E-71 |
Pfam | PF08501 | Shikimate dehydrogenase substrate binding domain | IPR013708 | Shikimate dehydrogenase substrate binding, N-terminal | 7 | 91 | 3.5E-18 |
Gene3D | G3DSA:3.40.50.10860 | 6 | 260 | 1.2E-70 | |||
CDD | cd01065 | NAD_bind_Shikimate_DH | 105 | 260 | 7.56521E-26 | ||
Hamap | MF_00222 | Shikimate dehydrogenase (NADP(+)) [aroE]. | IPR022893 | Shikimate dehydrogenase family | 2 | 275 | 29.192 |
Pfam | PF18317 | Shikimate 5'-dehydrogenase C-terminal domain | IPR041121 | SDH, C-terminal | 243 | 270 | 7.3E-10 |
SUPERFAMILY | SSF51735 | IPR036291 | NAD(P)-binding domain superfamily | 105 | 271 | 1.61E-39 | |
Pfam | PF01488 | Shikimate / quinate 5-dehydrogenase | IPR006151 | Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase | 121 | 197 | 1.5E-7 |
Gene3D | G3DSA:3.40.50.720 | 119 | 242 | 1.2E-70 | |||
SUPERFAMILY | SSF53223 | 2 | 103 | 2.3E-25 |