Burkholderia cenocepacia J2315, BCAS0338

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00422	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00422	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46955		IPR009061	Putative DNA-binding domain superfamily	10	120	5.86E-27
Pfam	PF13411	MerR HTH family regulatory protein	IPR000551	MerR-type HTH domain	11	72	5.9E-14
Gene3D	G3DSA:1.10.1660.10				1	124	1.1E-28
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	45	65	4.2E-7
Coils	Coil				91	118	-
SMART	SM00422		IPR000551	MerR-type HTH domain	10	78	3.5E-17
ProSiteProfiles	PS50937	MerR-type HTH domain profile.	IPR000551	MerR-type HTH domain	9	77	28.932
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	11	22	4.2E-7
PRINTS	PR00040	MerR bacterial regulatory protein HTH signature	IPR000551	MerR-type HTH domain	22	35	4.2E-7
CDD	cd01282	HTH_MerR-like_sg3			10	120	2.59228E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.