Burkholderia cenocepacia J2315, BCAS0334

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS01124
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 176 255 1.1E-22
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 12 128 41.893
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 13 125 3.1E-26
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 157 255 29.268
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 14 128 2.45248E-35
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 222 237 8.4E-7
Gene3D G3DSA:3.40.50.2300 6 143 3.9E-35
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 207 256 1.39E-12
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 5 137 7.26E-39
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 152 204 3.85E-7
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 237 253 8.4E-7
MobiDBLite mobidb-lite consensus disorder prediction 252 271 -
Gene3D G3DSA:1.10.10.60 151 262 3.8E-29
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 11 124 1.2E-36
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 170 253 1.7E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.