Burkholderia cenocepacia J2315, BCAS0323

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	5	55	6.15973E-18
CDD	cd06267	PBP1_LacI_sugar_binding_like			61	327	2.16359E-65
SMART	SM00354		IPR000843	LacI-type HTH domain	1	71	1.2E-25
Gene3D	G3DSA:1.10.260.40				1	54	7.8E-21
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	1	59	4.25E-17
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	3	48	5.0E-17
Gene3D	G3DSA:3.40.50.2300				55	308	1.2E-61
Gene3D	G3DSA:3.40.50.2300				162	291	1.2E-61
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	61	334	3.53E-59
Pfam	PF13377	Periplasmic binding protein-like domain			171	332	1.6E-31
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	2	56	31.421

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.