Burkholderia cenocepacia J2315, BCAS0258

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50949	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50949	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00345		IPR000524	Transcription regulator HTH, GntR	12	70	6.7E-13
ProSiteProfiles	PS50949	GntR-type HTH domain profile.	IPR000524	Transcription regulator HTH, GntR	6	73	17.495
Pfam	PF00392	Bacterial regulatory proteins, gntR family	IPR000524	Transcription regulator HTH, GntR	12	70	2.6E-16
Pfam	PF07729	FCD domain	IPR011711	GntR, C-terminal	80	201	1.9E-19
CDD	cd07377	WHTH_GntR	IPR000524	Transcription regulator HTH, GntR	9	71	1.29679E-15
SMART	SM00895		IPR011711	GntR, C-terminal	80	203	3.6E-13
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	9	74	1.84E-17
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	6	67	1.3E-17
Gene3D	G3DSA:1.20.120.530		IPR008920	Transcription regulator FadR/GntR, C-terminal	68	208	5.4E-20
SUPERFAMILY	SSF48008		IPR008920	Transcription regulator FadR/GntR, C-terminal	76	204	5.49E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.