Burkholderia cenocepacia J2315, BCAS0256

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 29 388 5.02449E-68
SUPERFAMILY SSF56935 25 388 2.15E-69
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 264 276 4.6E-6
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 12 360 3.5E-44
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 335 352 4.6E-6
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 105 115 4.6E-6
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 57 82 9.6E-6
Gene3D G3DSA:2.40.160.10 IPR023614 Porin domain superfamily 13 388 3.2E-74
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 165 176 4.6E-6
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 332 356 9.6E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.