Burkholderia cenocepacia J2315, BCAS0245 (rpsU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01165
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.5.1150 IPR038380 Ribosomal protein S21 superfamily 16 54 3.3E-16
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 13 22 3.5E-11
Hamap MF_00358 30S ribosomal protein S21 [rpsU]. IPR001911 Ribosomal protein S21 1 57 18.522
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 5 13 3.5E-11
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 25 35 3.5E-11
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Ribosomal protein S21 37 47 3.5E-11
MobiDBLite mobidb-lite consensus disorder prediction 34 56 -
Pfam PF01165 Ribosomal protein S21 IPR001911 Ribosomal protein S21 4 57 1.9E-17
TIGRFAM TIGR00030 S21p: ribosomal protein bS21 IPR001911 Ribosomal protein S21 7 56 1.6E-17
MobiDBLite mobidb-lite consensus disorder prediction 34 49 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.