Burkholderia cenocepacia J2315, BCAS0168

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00455
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50977 TetR-type HTH domain profile. IPR001647 DNA-binding HTH domain, TetR-type 8 68 21.559
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 14 27 2.0E-9
Pfam PF17937 Tetracyclin repressor-like, C-terminal domain IPR041479 TetR transcriptional regulator CgmR-like, C-terminal domain 84 183 3.0E-19
PRINTS PR00455 TetR bacterial regulatory protein HTH signature IPR001647 DNA-binding HTH domain, TetR-type 35 58 2.0E-9
SUPERFAMILY SSF48498 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily 105 181 2.22E-19
Pfam PF00440 Bacterial regulatory proteins, tetR family IPR001647 DNA-binding HTH domain, TetR-type 14 60 6.9E-14
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 1 75 1.28E-17
Gene3D G3DSA:1.10.357.10 8 185 3.8E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.