Burkholderia cenocepacia J2315, BCAS0167 (shc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071236 cellular response to antibiotic
EXP
Inferred from Experiment
Biological Process GO:0016104 triterpenoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02892
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019746 hopanoid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01507
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000250 lanosterol synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02892
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005811 lipid droplet
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02892
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042300 beta-amyrin synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02892
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016866 intramolecular transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02892
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj01110 Biosynthesis of secondary metabolites 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00909 Sesquiterpenoid and triterpenoid biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc diploterol biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc hopanoid biosynthesis (bacteria) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bcj00909 Sesquiterpenoid and triterpenoid biosynthesis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF48239 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid 43 311 1.78E-70
CDD cd02892 SQCY_1 IPR018333 Squalene cyclase 20 654 0.0
Pfam PF13243 Squalene-hopene cyclase C-terminal domain IPR032696 Squalene cyclase, C-terminal 318 659 6.6E-131
Gene3D G3DSA:1.50.10.20 24 657 2.8E-219
Coils Coil 678 679 -
Pfam PF13249 Squalene-hopene cyclase N-terminal domain IPR032697 Squalene cyclase, N-terminal 20 307 6.5E-112
SFLD SFLDG01016 Prenyltransferase Like 2 10 660 0.0
Gene3D G3DSA:1.50.10.20 41 317 2.8E-219
TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases IPR018333 Squalene cyclase 19 659 3.4E-176
SUPERFAMILY SSF48239 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid 306 660 2.51E-93
TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase IPR006400 Squalene hopene cyclase 10 660 1.6E-221

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.