Burkholderia cenocepacia J2315, BCAM2584

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF56935 36 383 1.4E-77
Gene3D G3DSA:2.40.160.10 IPR023614 Porin domain superfamily 36 383 2.8E-79
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 20 354 1.5E-49
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 326 350 7.8E-6
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 69 94 7.8E-6
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 37 383 4.41541E-78

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.