Burkholderia cenocepacia J2315, BCAM2419

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 109 218 1.83E-33
MobiDBLite mobidb-lite consensus disorder prediction 189 213 -
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 117 218 6.44384E-40
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 148 163 1.9E-14
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 163 179 1.9E-14
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 105 220 40.75
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 118 140 1.9E-14
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 93 220 2.6E-38
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 5.0
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 117 212 4.7E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.