Burkholderia cenocepacia J2315, BCAM2393

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01965 DJ-1/PfpI family IPR002818 DJ-1/PfpI 56 193 8.6E-12
MobiDBLite mobidb-lite consensus disorder prediction 335 357 -
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 236 334 30.27
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 232 283 8.87E-8
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 285 335 1.16E-12
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 249 332 3.4E-28
Gene3D G3DSA:1.10.10.60 228 336 1.2E-30
CDD cd03136 GATase1_AraC_ArgR_like 20 212 3.93212E-68
SUPERFAMILY SSF52317 IPR029062 Class I glutamine amidotransferase-like 19 211 1.58E-38
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 255 334 4.8E-25
ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. IPR018062 HTH domain AraC-type, conserved site 286 328 -
Coils Coil 252 272 -
Gene3D G3DSA:3.40.50.880 IPR029062 Class I glutamine amidotransferase-like 15 220 7.2E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.