Burkholderia cenocepacia J2315, BCAM2373

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 166 177 1.2E-7
Gene3D G3DSA:2.40.160.10 IPR023614 Porin domain superfamily 24 356 1.8E-66
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 297 321 9.5E-10
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 194 206 1.2E-7
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 165 182 9.5E-10
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 106 116 1.2E-7
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 300 317 1.2E-7
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 195 212 9.5E-10
SUPERFAMILY SSF56935 24 356 9.57E-68
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 63 88 9.5E-10
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 25 356 2.20202E-64
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 11 324 1.2E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.