Burkholderia cenocepacia J2315, BCAM2275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47413 IPR010982 Lambda repressor-like, DNA-binding domain superfamily 12 72 2.34E-7
Pfam PF13560 Helix-turn-helix domain 13 58 2.0E-7
SMART SM00530 IPR001387 Cro/C1-type helix-turn-helix domain 13 69 0.0064
Gene3D G3DSA:3.40.390.50 158 263 3.0E-8
CDD cd00093 HTH_XRE IPR001387 Cro/C1-type helix-turn-helix domain 12 69 1.40289E-5
Pfam PF06114 IrrE N-terminal-like domain IPR010359 IrrE N-terminal-like domain 175 306 3.1E-25
Gene3D G3DSA:1.10.260.40 10 69 2.3E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.