Burkholderia cenocepacia J2315, BCAM2105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00552
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00552
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50937 MerR-type HTH domain profile. IPR000551 MerR-type HTH domain 1 69 25.104
Pfam PF00376 MerR family regulatory protein IPR000551 MerR-type HTH domain 2 39 2.3E-14
Coils Coil 83 103 -
Pfam PF09278 MerR, DNA binding IPR015358 Transcription regulator MerR, DNA binding 47 104 1.1E-11
SUPERFAMILY SSF46955 IPR009061 Putative DNA-binding domain superfamily 1 112 3.66E-26
ProSitePatterns PS00552 MerR-type HTH domain signature. IPR000551 MerR-type HTH domain 4 26 -
Gene3D G3DSA:1.10.1660.10 2 147 1.5E-24
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 13 26 7.7E-6
SMART SM00422 IPR000551 MerR-type HTH domain 1 70 3.6E-17
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 2 13 7.7E-6
PRINTS PR00040 MerR bacterial regulatory protein HTH signature IPR000551 MerR-type HTH domain 37 57 7.7E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.