Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006352 | DNA-templated transcription, initiation |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016987 | sigma factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF08281
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
TIGRFAM | TIGR02937 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family | IPR014284 | RNA polymerase sigma-70 like domain | 96 | 251 | 1.1E-30 |
MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | ||
CDD | cd06171 | Sigma70_r4 | 195 | 248 | 7.39054E-11 | ||
SUPERFAMILY | SSF88946 | IPR013325 | RNA polymerase sigma factor, region 2 | 78 | 182 | 9.42E-27 | |
Pfam | PF04542 | Sigma-70 region 2 | IPR007627 | RNA polymerase sigma-70 region 2 | 100 | 167 | 3.1E-20 |
Pfam | PF08281 | Sigma-70, region 4 | IPR013249 | RNA polymerase sigma factor 70, region 4 type 2 | 196 | 247 | 3.8E-14 |
Gene3D | G3DSA:1.10.1740.10 | 75 | 193 | 3.1E-26 | |||
SUPERFAMILY | SSF88659 | IPR013324 | RNA polymerase sigma factor, region 3/4-like | 171 | 253 | 1.5E-15 | |
ProSitePatterns | PS01063 | Sigma-70 factors ECF subfamily signature. | IPR000838 | RNA polymerase sigma factor 70, ECF, conserved site | 122 | 154 | - |
MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 80 | - | ||
Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 194 | 254 | 8.8E-18 |