Burkholderia cenocepacia J2315, BCAM1651

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 2.2E-10
CDD cd17503 MFS_LmrB_MDR_like 14 447 9.08E-83
PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 2.2E-10
Gene3D G3DSA:1.20.1250.20 253 449 6.0E-13
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 10 449 34.262
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 6 445 3.66E-62
Gene3D G3DSA:1.20.1720.10 10 214 1.6E-49
PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.2E-10
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 15 404 2.4E-50
TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family IPR004638 Drug resistance transporter EmrB-like 13 407 1.5E-70
PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 2.2E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.