Burkholderia cenocepacia J2315, BCAM1503

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50885
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50111
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50111
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bcj02020 Two-component system 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bcj02030 Bacterial chemotaxis 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00672 HAMP domain IPR003660 HAMP domain 297 345 3.7E-12
Coils Coil 554 574 -
CDD cd11386 MCP_signal 377 576 1.05802E-54
Gene3D G3DSA:3.30.450.20 55 267 5.1E-52
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 564 2.4E-51
SMART SM00304 IPR003660 HAMP domain 295 349 3.8E-13
SMART SM00283 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 597 2.6E-89
ProSiteProfiles PS50111 Bacterial chemotaxis sensory transducers domain profile. IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 583 50.798
CDD cd12912 PDC2_MCP_like 177 263 4.74557E-11
CDD cd06225 HAMP IPR003660 HAMP domain 299 346 1.72433E-9
ProSiteProfiles PS50885 HAMP domain profile. IPR003660 HAMP domain 295 349 10.849
CDD cd12913 PDC1_MCP_like 95 170 2.56065E-22
Gene3D G3DSA:3.30.450.20 64 168 5.1E-52
SUPERFAMILY SSF58104 317 598 2.09E-71
Pfam PF02743 Cache domain IPR033479 Double Cache domain 1 26 257 1.1E-30
SUPERFAMILY SSF103190 IPR029151 Periplasmic sensor-like domain superfamily 107 177 7.32E-14
Gene3D G3DSA:1.10.287.950 295 599 1.7E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.